Polyp Predicament: 2b-RAD reveals hidden dissimilarity in genus Zoanthus (Anthozoa: Hexacorallia)

dc.contributor.advisorEasson, Cole G
dc.contributor.authorSmith, Jeremy Edward
dc.contributor.committeememberLeblond, Jeff
dc.contributor.committeememberBergemann, Sarah
dc.contributor.committeememberSeipelt-Thiemann, Rebecca L
dc.date.accessioned2022-08-08T22:07:19Z
dc.date.available2022-08-08T22:07:19Z
dc.date.issued2022
dc.date.updated2022-08-08T22:07:19Z
dc.description.abstractZoanthids (order Zoantharia, Gray 1832) are found in shallow reef systems throughout tropical oceans. These corals are also common in-home aquariums where their vibrant colors make them highly sought after. Over years of study these organisms have been grouped in a myriad of ways due to the complexity of identifying them morphologically. More recently, molecular techniques have been employed in zoanthid identification. Over the past twenty years researchers have produced many gene trees and used phylogenies to resolve zoanthid species relationships, but often produced contradictory results. In this study, we investigated 15 zoanthids that are popular within the aquarium trade, and one collected in the Florida Keys. Our aim was to identify potential linkages between morphology and genetics and determine how to best resolve species delimitations in the genus Zoanthus. 2b-RAD improved the ability to resolve species boundaries within the genus Zoanthus and a lack of consensus revealed a disconnect between molecular markers and morphology.
dc.description.degreeM.S.
dc.identifier.urihttps://jewlscholar.mtsu.edu/handle/mtsu/6760
dc.language.rfc3066en
dc.publisherMiddle Tennessee State University
dc.source.urihttp://dissertations.umi.com/mtsu:11631
dc.subject2b-RAD
dc.subjectBiology
dc.subjectCoral
dc.subjectGenetics
dc.subjectPopulation Genetics
dc.subjectZoanthid
dc.subjectBiology
dc.subjectGenetics
dc.subjectCellular biology
dc.thesis.degreelevelmasters
dc.titlePolyp Predicament: 2b-RAD reveals hidden dissimilarity in genus Zoanthus (Anthozoa: Hexacorallia)

Files

Original bundle

Now showing 1 - 5 of 9
Loading...
Thumbnail Image
Name:
Smith_mtsu_0170N_506/Appendix 1_Guide to processing 2bRAD sequences.txt
Size:
6.4 KB
Format:
Plain Text
Loading...
Thumbnail Image
Name:
Smith_mtsu_0170N_506/Appendix 2_Genpop file conversion and Mantel tests.R
Size:
5.5 KB
Format:
Unknown data format
Loading...
Thumbnail Image
Name:
Smith_mtsu_0170N_506/Appendix 3_NMDS Script.R
Size:
1.22 KB
Format:
Unknown data format
Loading...
Thumbnail Image
Name:
Smith_mtsu_0170N_506/Appendix 4_Phylo Signal.R
Size:
1.78 KB
Format:
Unknown data format
Loading...
Thumbnail Image
Name:
Smith_mtsu_0170N_506/Morpho_Metrics_Avg_Std_dev_and_n.xlsx
Size:
28.11 KB
Format:
Microsoft Excel XML

License bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
license.txt
Size:
2.27 KB
Format:
Item-specific license agreed upon to submission
Description:

Collections